Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shox2P70390 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.61□□□□□ -0.23
Shox2P70390 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.61□□□□□ -0.23
Shox2P70390 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Shox2P70390 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Shox2P70390 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.61□□□□□ -0.23
Shox2P70390 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shox2P70390 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Shox2P70390 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.61□□□□□ -0.23
Shox2P70390 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.61□□□□□ -0.23
Shox2P70390 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.61□□□□□ -0.23
Shox2P70390 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.61□□□□□ -0.23
Shox2P70390 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.61□□□□□ -0.23
Shox2P70390 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Shox2P70390 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.6□□□□□ -0.23
Shox2P70390 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Shox2P70390 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Shox2P70390 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Gm15678-201ENSMUST00000117573 960 ntBASIC13.6□□□□□ -0.23
Shox2P70390 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Shox2P70390 Gm29741-201ENSMUST00000192667 421 ntBASIC13.6□□□□□ -0.23
Shox2P70390 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.6□□□□□ -0.23
Shox2P70390 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.6□□□□□ -0.23
Shox2P70390 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Shox2P70390 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Shox2P70390 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.6□□□□□ -0.23
Shox2P70390 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.6□□□□□ -0.23
Shox2P70390 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Shox2P70390 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shox2P70390 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.59□□□□□ -0.23
Shox2P70390 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.59□□□□□ -0.23
Shox2P70390 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Shox2P70390 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Shox2P70390 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Shox2P70390 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Shox2P70390 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.59□□□□□ -0.23
Shox2P70390 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.59□□□□□ -0.23
Shox2P70390 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shox2P70390 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.59□□□□□ -0.23
Shox2P70390 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.59□□□□□ -0.23
Shox2P70390 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms