Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rad50P70388 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rad50P70388 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.53■□□□□ 0.24
Rad50P70388 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rad50P70388 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Rad50P70388 Gm42612-201ENSMUST00000197986 623 ntBASIC16.53■□□□□ 0.24
Rad50P70388 Gm43170-201ENSMUST00000199827 612 ntBASIC16.53■□□□□ 0.24
Rad50P70388 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rad50P70388 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rad50P70388 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.53■□□□□ 0.24
Rad50P70388 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rad50P70388 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rad50P70388 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.53■□□□□ 0.24
Rad50P70388 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rad50P70388 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.53■□□□□ 0.24
Rad50P70388 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rad50P70388 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rad50P70388 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rad50P70388 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rad50P70388 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
Rad50P70388 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rad50P70388 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rad50P70388 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rad50P70388 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rad50P70388 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rad50P70388 Gm18018-201ENSMUST00000198273 408 ntBASIC16.52■□□□□ 0.24
Rad50P70388 Gm6745-201ENSMUST00000199216 526 ntBASIC16.52■□□□□ 0.24
Rad50P70388 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rad50P70388 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rad50P70388 Gm15823-201ENSMUST00000064305 670 ntBASIC16.52■□□□□ 0.24
Rad50P70388 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rad50P70388 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rad50P70388 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Rad50P70388 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.52■□□□□ 0.24
Rad50P70388 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rad50P70388 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rad50P70388 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rad50P70388 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rad50P70388 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Rad50P70388 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rad50P70388 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rad50P70388 Gm12585-201ENSMUST00000117307 290 ntBASIC16.51■□□□□ 0.23
Rad50P70388 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rad50P70388 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.51■□□□□ 0.23
Rad50P70388 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rad50P70388 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.51■□□□□ 0.23
Rad50P70388 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rad50P70388 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rad50P70388 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rad50P70388 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rad50P70388 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rad50P70388 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rad50P70388 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.5■□□□□ 0.23
Rad50P70388 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.5■□□□□ 0.23
Rad50P70388 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rad50P70388 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rad50P70388 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rad50P70388 Mir698-201ENSMUST00000102164 109 ntBASIC16.5■□□□□ 0.23
Rad50P70388 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rad50P70388 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rad50P70388 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rad50P70388 Gm23984-201ENSMUST00000157139 203 ntBASIC16.5■□□□□ 0.23
Rad50P70388 Gm21854-201ENSMUST00000179901 471 ntBASIC16.5■□□□□ 0.23
Rad50P70388 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.5■□□□□ 0.23
Rad50P70388 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.5■□□□□ 0.23
Rad50P70388 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rad50P70388 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.5■□□□□ 0.23
Rad50P70388 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.5■□□□□ 0.23
Rad50P70388 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.5■□□□□ 0.23
Rad50P70388 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Rad50P70388 Gm9797-201ENSMUST00000052902 613 ntBASIC16.5■□□□□ 0.23
Rad50P70388 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rad50P70388 Gm6180-201ENSMUST00000065243 498 ntBASIC16.5■□□□□ 0.23
Rad50P70388 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rad50P70388 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms