Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm13015-201ENSMUST00000118674 204 ntBASIC14.23□□□□□ -0.13
Smad1P70340 Gm15487-201ENSMUST00000122373 465 ntBASIC14.23□□□□□ -0.13
Smad1P70340 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Gm10275-202ENSMUST00000168697 495 ntBASIC14.23□□□□□ -0.13
Smad1P70340 Gm18187-201ENSMUST00000196476 984 ntBASIC14.23□□□□□ -0.13
Smad1P70340 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Gm44855-201ENSMUST00000205725 362 ntBASIC14.23□□□□□ -0.13
Smad1P70340 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Gm10275-201ENSMUST00000092620 635 ntBASIC14.23□□□□□ -0.13
Smad1P70340 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smad1P70340 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Smad1P70340 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smad1P70340 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smad1P70340 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smad1P70340 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smad1P70340 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smad1P70340 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.22□□□□□ -0.13
Smad1P70340 Syt7-204ENSMUST00000223586 1344 ntBASIC14.22□□□□□ -0.13
Smad1P70340 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Gm27838-201ENSMUST00000184829 128 ntBASIC14.22□□□□□ -0.13
Smad1P70340 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Grk6-205ENSMUST00000224653 2976 ntBASIC14.22□□□□□ -0.13
Smad1P70340 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Smad1P70340 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Smad1P70340 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.22□□□□□ -0.13
Smad1P70340 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smad1P70340 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.21□□□□□ -0.13
Smad1P70340 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smad1P70340 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smad1P70340 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smad1P70340 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.21□□□□□ -0.13
Smad1P70340 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smad1P70340 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smad1P70340 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smad1P70340 Gm12490-201ENSMUST00000120255 560 ntBASIC14.21□□□□□ -0.13
Smad1P70340 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.21□□□□□ -0.13
Smad1P70340 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.21□□□□□ -0.13
Smad1P70340 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.21□□□□□ -0.13
Smad1P70340 Gm27680-201ENSMUST00000184192 160 ntBASIC14.21□□□□□ -0.13
Smad1P70340 Gm28631-201ENSMUST00000190740 334 ntBASIC14.21□□□□□ -0.13
Smad1P70340 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.21□□□□□ -0.13
Smad1P70340 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.21□□□□□ -0.13
Smad1P70340 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.21□□□□□ -0.13
Smad1P70340 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smad1P70340 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smad1P70340 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.21□□□□□ -0.13
Smad1P70340 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smad1P70340 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.21□□□□□ -0.14
Smad1P70340 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Smad1P70340 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.21□□□□□ -0.14
Smad1P70340 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smad1P70340 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smad1P70340 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smad1P70340 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms