Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Hmgb1P63158 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
Hmgb1P63158 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Mir698-201ENSMUST00000102164 109 ntBASIC15.18■□□□□ 0.02
Hmgb1P63158 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.18■□□□□ 0.02
Hmgb1P63158 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.18■□□□□ 0.02
Hmgb1P63158 Gm15693-201ENSMUST00000120470 637 ntBASIC15.18■□□□□ 0.02
Hmgb1P63158 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Gm14822-201ENSMUST00000122247 291 ntBASIC15.18■□□□□ 0.02
Hmgb1P63158 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Gm25925-201ENSMUST00000158314 306 ntBASIC15.18■□□□□ 0.02
Hmgb1P63158 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.18■□□□□ 0.02
Hmgb1P63158 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.18■□□□□ 0.02
Hmgb1P63158 Chchd1-203ENSMUST00000224633 557 ntBASIC15.18■□□□□ 0.02
Hmgb1P63158 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hmgb1P63158 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.18■□□□□ 0.02
Hmgb1P63158 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hmgb1P63158 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgb1P63158 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.17■□□□□ 0.02
Hmgb1P63158 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hmgb1P63158 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Hmgb1P63158 Gm28630-201ENSMUST00000187806 498 ntBASIC15.17■□□□□ 0.02
Hmgb1P63158 Gm7774-201ENSMUST00000200064 533 ntBASIC15.17■□□□□ 0.02
Hmgb1P63158 Gm5312-201ENSMUST00000203728 547 ntBASIC15.17■□□□□ 0.02
Hmgb1P63158 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hmgb1P63158 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.17■□□□□ 0.02
Hmgb1P63158 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.17■□□□□ 0.02
Hmgb1P63158 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hmgb1P63158 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hmgb1P63158 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.17■□□□□ 0.02
Hmgb1P63158 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgb1P63158 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgb1P63158 Gm6415-201ENSMUST00000118488 348 ntBASIC15.16■□□□□ 0.02
Hmgb1P63158 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Hmgb1P63158 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgb1P63158 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Gm5779-201ENSMUST00000218467 910 ntBASIC15.16■□□□□ 0.02
Hmgb1P63158 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgb1P63158 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC15.16■□□□□ 0.02
Hmgb1P63158 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgb1P63158 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hmgb1P63158 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgb1P63158 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.16■□□□□ 0.02
Hmgb1P63158 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgb1P63158 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.15■□□□□ 0.02
Hmgb1P63158 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hmgb1P63158 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Mir449b-201ENSMUST00000104833 80 ntBASIC15.15■□□□□ 0.02
Hmgb1P63158 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms