Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rps28P62858 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rps28P62858 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 AC154725.1-201ENSMUST00000224826 1961 ntBASIC8.01□□□□□ -1.13
Rps28P62858 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rps28P62858 Gfra2-202ENSMUST00000227633 1480 ntBASIC8□□□□□ -1.13
Rps28P62858 Gm44292-201ENSMUST00000205194 2364 ntBASIC8□□□□□ -1.13
Rps28P62858 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rps28P62858 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rps28P62858 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Gm8584-201ENSMUST00000171982 758 ntBASIC8□□□□□ -1.13
Rps28P62858 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Gm27000-201ENSMUST00000182943 842 ntBASIC8□□□□□ -1.13
Rps28P62858 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Rps28P62858 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC8□□□□□ -1.13
Rps28P62858 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Rps28P62858 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC8□□□□□ -1.13
Rps28P62858 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Gm43075-201ENSMUST00000198613 3905 ntBASIC8□□□□□ -1.13
Rps28P62858 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rps28P62858 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rps28P62858 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rps28P62858 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC8□□□□□ -1.13
Rps28P62858 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rps28P62858 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 AC159195.1-201ENSMUST00000225867 2086 ntBASIC7.99□□□□□ -1.13
Rps28P62858 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC7.99□□□□□ -1.13
Rps28P62858 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Gm38285-201ENSMUST00000192928 922 ntBASIC7.99□□□□□ -1.13
Rps28P62858 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC7.99□□□□□ -1.13
Rps28P62858 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rps28P62858 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms