Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nup43P59235 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nup43P59235 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.02□□□□□ -0.33
Nup43P59235 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nup43P59235 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nup43P59235 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nup43P59235 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Nup43P59235 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Nup43P59235 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Nup43P59235 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.01□□□□□ -0.33
Nup43P59235 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Syt7-205ENSMUST00000224135 1557 ntBASIC13.01□□□□□ -0.33
Nup43P59235 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nup43P59235 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Nup43P59235 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup43P59235 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Nup43P59235 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup43P59235 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup43P59235 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup43P59235 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13□□□□□ -0.33
Nup43P59235 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Gm22189-201ENSMUST00000103822 86 ntBASIC13□□□□□ -0.33
Nup43P59235 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13□□□□□ -0.33
Nup43P59235 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13□□□□□ -0.33
Nup43P59235 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Nup43P59235 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13□□□□□ -0.33
Nup43P59235 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nup43P59235 Gm42612-201ENSMUST00000197986 623 ntBASIC13□□□□□ -0.33
Nup43P59235 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Gm43170-201ENSMUST00000199827 612 ntBASIC13□□□□□ -0.33
Nup43P59235 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13□□□□□ -0.33
Nup43P59235 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13□□□□□ -0.33
Nup43P59235 Gm6218-201ENSMUST00000219812 628 ntBASIC13□□□□□ -0.33
Nup43P59235 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nup43P59235 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup43P59235 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup43P59235 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup43P59235 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup43P59235 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup43P59235 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup43P59235 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup43P59235 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup43P59235 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup43P59235 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Nup43P59235 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nup43P59235 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup43P59235 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms