Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.39□□□□□ -0.11
NcanP55066 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NcanP55066 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.39□□□□□ -0.11
NcanP55066 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.39□□□□□ -0.11
NcanP55066 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NcanP55066 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.39□□□□□ -0.11
NcanP55066 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NcanP55066 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
NcanP55066 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NcanP55066 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.39□□□□□ -0.11
NcanP55066 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.39□□□□□ -0.11
NcanP55066 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.39□□□□□ -0.11
NcanP55066 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NcanP55066 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.38□□□□□ -0.11
NcanP55066 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NcanP55066 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.38□□□□□ -0.11
NcanP55066 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.38□□□□□ -0.11
NcanP55066 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NcanP55066 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.38□□□□□ -0.11
NcanP55066 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.38□□□□□ -0.11
NcanP55066 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.38□□□□□ -0.11
NcanP55066 Gm24548-201ENSMUST00000158650 108 ntBASIC14.38□□□□□ -0.11
NcanP55066 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.38□□□□□ -0.11
NcanP55066 Gm18584-201ENSMUST00000203098 964 ntBASIC14.38□□□□□ -0.11
NcanP55066 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.38□□□□□ -0.11
NcanP55066 Gm19163-201ENSMUST00000223313 780 ntBASIC14.38□□□□□ -0.11
NcanP55066 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NcanP55066 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NcanP55066 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NcanP55066 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
NcanP55066 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NcanP55066 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.37□□□□□ -0.11
NcanP55066 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NcanP55066 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.37□□□□□ -0.11
NcanP55066 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.37□□□□□ -0.11
NcanP55066 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
NcanP55066 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NcanP55066 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Gm44069-201ENSMUST00000204898 506 ntBASIC14.37□□□□□ -0.11
NcanP55066 Gm44551-201ENSMUST00000208804 171 ntBASIC14.37□□□□□ -0.11
NcanP55066 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.37□□□□□ -0.11
NcanP55066 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.37□□□□□ -0.11
NcanP55066 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NcanP55066 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.37□□□□□ -0.11
NcanP55066 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NcanP55066 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NcanP55066 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms