Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ephb3P54754 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ephb3P54754 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.38□□□□□ -0.11
Ephb3P54754 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ephb3P54754 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.38□□□□□ -0.11
Ephb3P54754 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ephb3P54754 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ephb3P54754 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ephb3P54754 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.37□□□□□ -0.11
Ephb3P54754 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.37□□□□□ -0.11
Ephb3P54754 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Itm2b-204ENSMUST00000228637 783 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Snora73a-201ENSMUST00000082453 205 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Gm24447-201ENSMUST00000083977 338 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ephb3P54754 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Ephb3P54754 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ephb3P54754 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ephb3P54754 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
Ephb3P54754 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.37□□□□□ -0.11
Ephb3P54754 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ephb3P54754 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ephb3P54754 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.36□□□□□ -0.11
Ephb3P54754 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ephb3P54754 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.36□□□□□ -0.11
Ephb3P54754 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ephb3P54754 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.36□□□□□ -0.11
Ephb3P54754 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ephb3P54754 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.36□□□□□ -0.11
Ephb3P54754 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.36□□□□□ -0.11
Ephb3P54754 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.36□□□□□ -0.11
Ephb3P54754 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.36□□□□□ -0.11
Ephb3P54754 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.36□□□□□ -0.11
Ephb3P54754 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.36□□□□□ -0.11
Ephb3P54754 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ephb3P54754 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Ephb3P54754 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.36□□□□□ -0.11
Ephb3P54754 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.36□□□□□ -0.11
Ephb3P54754 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ephb3P54754 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.36□□□□□ -0.11
Ephb3P54754 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.35□□□□□ -0.11
Ephb3P54754 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ephb3P54754 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ephb3P54754 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ephb3P54754 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Ephb3P54754 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Mir7070-201ENSMUST00000183657 86 ntBASIC14.35□□□□□ -0.11
Ephb3P54754 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ephb3P54754 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ephb3P54754 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms