Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm4857-201ENSMUST00000192718 785 ntBASIC17.34■□□□□ 0.37
Msh6P54276 Gm7783-201ENSMUST00000204795 781 ntBASIC17.34■□□□□ 0.37
Msh6P54276 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.34■□□□□ 0.37
Msh6P54276 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.34■□□□□ 0.37
Msh6P54276 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.34■□□□□ 0.37
Msh6P54276 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.33■□□□□ 0.37
Msh6P54276 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh6P54276 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh6P54276 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh6P54276 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh6P54276 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Msh6P54276 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh6P54276 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.33■□□□□ 0.36
Msh6P54276 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Msh6P54276 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Msh6P54276 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Msh6P54276 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.33■□□□□ 0.36
Msh6P54276 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.33■□□□□ 0.36
Msh6P54276 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.33■□□□□ 0.36
Msh6P54276 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Msh6P54276 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh6P54276 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.33■□□□□ 0.36
Msh6P54276 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.32■□□□□ 0.36
Msh6P54276 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Msh6P54276 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.32■□□□□ 0.36
Msh6P54276 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.32■□□□□ 0.36
Msh6P54276 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Gm27516-201ENSMUST00000184237 98 ntBASIC17.32■□□□□ 0.36
Msh6P54276 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.32■□□□□ 0.36
Msh6P54276 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Snora73a-201ENSMUST00000082453 205 ntBASIC17.32■□□□□ 0.36
Msh6P54276 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Msh6P54276 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh6P54276 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Msh6P54276 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Gm38266-201ENSMUST00000194931 421 ntBASIC17.31■□□□□ 0.36
Msh6P54276 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.31■□□□□ 0.36
Msh6P54276 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.31■□□□□ 0.36
Msh6P54276 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Msh6P54276 Gm24526-201ENSMUST00000082921 158 ntBASIC17.31■□□□□ 0.36
Msh6P54276 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.31■□□□□ 0.36
Msh6P54276 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Msh6P54276 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.31■□□□□ 0.36
Msh6P54276 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Msh6P54276 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh6P54276 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh6P54276 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh6P54276 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Msh6P54276 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms