Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Mir497b-201ENSMUST00000093601 125 ntBASIC14.01□□□□□ -0.17
Sox1P53783 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.01□□□□□ -0.17
Sox1P53783 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sox1P53783 Gm23200-201ENSMUST00000104379 132 ntBASIC14□□□□□ -0.17
Sox1P53783 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Gm13047-201ENSMUST00000117116 815 ntBASIC14□□□□□ -0.17
Sox1P53783 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Mir6958-201ENSMUST00000184207 73 ntBASIC14□□□□□ -0.17
Sox1P53783 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14□□□□□ -0.17
Sox1P53783 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Gm30285-201ENSMUST00000214614 422 ntBASIC14□□□□□ -0.17
Sox1P53783 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14□□□□□ -0.17
Sox1P53783 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Gm18615-201ENSMUST00000222919 1031 ntBASIC14□□□□□ -0.17
Sox1P53783 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox1P53783 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sox1P53783 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Sox1P53783 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sox1P53783 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.99□□□□□ -0.17
Sox1P53783 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Sox1P53783 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.99□□□□□ -0.17
Sox1P53783 Gm16397-201ENSMUST00000122201 494 ntBASIC13.99□□□□□ -0.17
Sox1P53783 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.99□□□□□ -0.17
Sox1P53783 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sox1P53783 Gm29608-201ENSMUST00000190444 463 ntBASIC13.99□□□□□ -0.17
Sox1P53783 Gm38317-201ENSMUST00000195564 343 ntBASIC13.99□□□□□ -0.17
Sox1P53783 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sox1P53783 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.99□□□□□ -0.17
Sox1P53783 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox1P53783 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox1P53783 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.98□□□□□ -0.17
Sox1P53783 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox1P53783 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms