Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc3P49135 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ercc3P49135 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ercc3P49135 Gm7488-201ENSMUST00000117148 684 ntBASIC16.36■□□□□ 0.21
Ercc3P49135 Gm13385-201ENSMUST00000121089 220 ntBASIC16.36■□□□□ 0.21
Ercc3P49135 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Ercc3P49135 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.36■□□□□ 0.21
Ercc3P49135 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.36■□□□□ 0.21
Ercc3P49135 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.36■□□□□ 0.21
Ercc3P49135 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Gm17795-201ENSMUST00000214505 757 ntBASIC16.36■□□□□ 0.21
Ercc3P49135 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.36■□□□□ 0.21
Ercc3P49135 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ercc3P49135 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ercc3P49135 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ercc3P49135 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc3P49135 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ercc3P49135 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.35■□□□□ 0.21
Ercc3P49135 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.35■□□□□ 0.21
Ercc3P49135 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.35■□□□□ 0.21
Ercc3P49135 Gm12859-201ENSMUST00000117834 427 ntBASIC16.35■□□□□ 0.21
Ercc3P49135 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.35■□□□□ 0.21
Ercc3P49135 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.35■□□□□ 0.21
Ercc3P49135 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.35■□□□□ 0.21
Ercc3P49135 Gm5186-201ENSMUST00000218781 920 ntBASIC16.35■□□□□ 0.21
Ercc3P49135 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ercc3P49135 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Ercc3P49135 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ercc3P49135 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.35■□□□□ 0.21
Ercc3P49135 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc3P49135 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ercc3P49135 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ercc3P49135 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.34■□□□□ 0.21
Ercc3P49135 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.34■□□□□ 0.21
Ercc3P49135 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.34■□□□□ 0.21
Ercc3P49135 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.34■□□□□ 0.21
Ercc3P49135 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ercc3P49135 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms