Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdx2P43241 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdx2P43241 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdx2P43241 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdx2P43241 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Cdx2P43241 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.03□□□□□ -0.32
Cdx2P43241 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.03□□□□□ -0.32
Cdx2P43241 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.03□□□□□ -0.32
Cdx2P43241 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Gm42627-201ENSMUST00000197347 224 ntBASIC13.03□□□□□ -0.32
Cdx2P43241 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.03□□□□□ -0.32
Cdx2P43241 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.03□□□□□ -0.32
Cdx2P43241 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdx2P43241 Gm24526-201ENSMUST00000082921 158 ntBASIC13.03□□□□□ -0.32
Cdx2P43241 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdx2P43241 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cdx2P43241 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdx2P43241 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdx2P43241 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.02□□□□□ -0.32
Cdx2P43241 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdx2P43241 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.02□□□□□ -0.32
Cdx2P43241 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdx2P43241 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdx2P43241 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdx2P43241 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdx2P43241 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdx2P43241 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdx2P43241 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.02□□□□□ -0.32
Cdx2P43241 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.02□□□□□ -0.33
Cdx2P43241 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Cdx2P43241 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdx2P43241 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.02□□□□□ -0.33
Cdx2P43241 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.02□□□□□ -0.33
Cdx2P43241 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Cdx2P43241 Gm7783-201ENSMUST00000204795 781 ntBASIC13.02□□□□□ -0.33
Cdx2P43241 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Snora73a-201ENSMUST00000082453 205 ntBASIC13.02□□□□□ -0.33
Cdx2P43241 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdx2P43241 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdx2P43241 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdx2P43241 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdx2P43241 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdx2P43241 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdx2P43241 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdx2P43241 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdx2P43241 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdx2P43241 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm13342-201ENSMUST00000121055 207 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm12403-201ENSMUST00000121384 959 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdx2P43241 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Gm8584-201ENSMUST00000171982 758 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms