Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
HttP42859 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.31□□□□□ -0.12
HttP42859 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.31□□□□□ -0.12
HttP42859 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HttP42859 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.31□□□□□ -0.12
HttP42859 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
HttP42859 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
HttP42859 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.3□□□□□ -0.12
HttP42859 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
HttP42859 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HttP42859 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.3□□□□□ -0.12
HttP42859 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Rprl1-202ENSMUST00000198476 238 ntBASIC14.3□□□□□ -0.12
HttP42859 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.3□□□□□ -0.12
HttP42859 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HttP42859 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
HttP42859 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.3□□□□□ -0.12
HttP42859 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HttP42859 Gm23218-201ENSMUST00000158124 276 ntBASIC14.3□□□□□ -0.12
HttP42859 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.3□□□□□ -0.12
HttP42859 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HttP42859 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.3□□□□□ -0.12
HttP42859 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.29□□□□□ -0.12
HttP42859 Gm45433-201ENSMUST00000209386 247 ntBASIC14.29□□□□□ -0.12
HttP42859 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.29□□□□□ -0.12
HttP42859 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.29□□□□□ -0.12
HttP42859 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HttP42859 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Gm11340-201ENSMUST00000119226 412 ntBASIC14.29□□□□□ -0.12
HttP42859 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.29□□□□□ -0.12
HttP42859 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.29□□□□□ -0.12
HttP42859 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HttP42859 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HttP42859 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HttP42859 Gm12380-201ENSMUST00000119012 544 ntBASIC14.28□□□□□ -0.12
HttP42859 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HttP42859 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.28□□□□□ -0.12
HttP42859 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HttP42859 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HttP42859 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.28□□□□□ -0.12
HttP42859 Gm12165-201ENSMUST00000117047 342 ntBASIC14.28□□□□□ -0.12
HttP42859 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HttP42859 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.28□□□□□ -0.12
HttP42859 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms