Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LdlrP35951 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
LdlrP35951 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LdlrP35951 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LdlrP35951 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LdlrP35951 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
LdlrP35951 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
LdlrP35951 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LdlrP35951 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LdlrP35951 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LdlrP35951 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Gm18737-201ENSMUST00000173594 937 ntBASIC13.72□□□□□ -0.21
LdlrP35951 Mir8102-201ENSMUST00000184148 139 ntBASIC13.72□□□□□ -0.21
LdlrP35951 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.72□□□□□ -0.21
LdlrP35951 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.72□□□□□ -0.21
LdlrP35951 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.72□□□□□ -0.21
LdlrP35951 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LdlrP35951 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
LdlrP35951 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LdlrP35951 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.71□□□□□ -0.21
LdlrP35951 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
LdlrP35951 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.71□□□□□ -0.21
LdlrP35951 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LdlrP35951 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LdlrP35951 Gm11543-201ENSMUST00000120758 370 ntBASIC13.71□□□□□ -0.21
LdlrP35951 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LdlrP35951 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.71□□□□□ -0.21
LdlrP35951 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LdlrP35951 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.71□□□□□ -0.21
LdlrP35951 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LdlrP35951 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.71□□□□□ -0.21
LdlrP35951 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LdlrP35951 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.71□□□□□ -0.21
LdlrP35951 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms