Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
RetP35546 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Gm11918-201ENSMUST00000121660 179 ntBASIC12.93□□□□□ -0.34
RetP35546 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.93□□□□□ -0.34
RetP35546 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.93□□□□□ -0.34
RetP35546 Gm27631-201ENSMUST00000184163 466 ntBASIC12.93□□□□□ -0.34
RetP35546 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.93□□□□□ -0.34
RetP35546 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.93□□□□□ -0.34
RetP35546 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
RetP35546 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RetP35546 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.92□□□□□ -0.34
RetP35546 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RetP35546 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.92□□□□□ -0.34
RetP35546 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.92□□□□□ -0.34
RetP35546 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.92□□□□□ -0.34
RetP35546 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.92□□□□□ -0.34
RetP35546 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.92□□□□□ -0.34
RetP35546 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RetP35546 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Gm44608-201ENSMUST00000206827 855 ntBASIC12.92□□□□□ -0.34
RetP35546 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.92□□□□□ -0.34
RetP35546 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.92□□□□□ -0.34
RetP35546 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RetP35546 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RetP35546 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
RetP35546 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RetP35546 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
RetP35546 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.91□□□□□ -0.34
RetP35546 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.91□□□□□ -0.34
RetP35546 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RetP35546 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.91□□□□□ -0.34
RetP35546 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.91□□□□□ -0.34
RetP35546 Gm15957-201ENSMUST00000118893 974 ntBASIC12.91□□□□□ -0.34
RetP35546 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.91□□□□□ -0.34
RetP35546 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Gm6266-201ENSMUST00000203844 806 ntBASIC12.91□□□□□ -0.34
RetP35546 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.91□□□□□ -0.34
RetP35546 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.91□□□□□ -0.34
RetP35546 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.91□□□□□ -0.34
RetP35546 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RetP35546 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RetP35546 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RetP35546 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RetP35546 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RetP35546 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RetP35546 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms