Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Mmp13P33435 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.12□□□□□ -0.15
Mmp13P33435 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.11□□□□□ -0.15
Mmp13P33435 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp13P33435 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Mmp13P33435 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp13P33435 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.11□□□□□ -0.15
Mmp13P33435 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.11□□□□□ -0.15
Mmp13P33435 Gm17837-201ENSMUST00000186435 985 ntBASIC14.11□□□□□ -0.15
Mmp13P33435 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Mmp13P33435 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Mmp13P33435 Gm18766-201ENSMUST00000189811 808 ntBASIC14.11□□□□□ -0.15
Mmp13P33435 Gm29541-201ENSMUST00000191351 678 ntBASIC14.11□□□□□ -0.15
Mmp13P33435 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.11□□□□□ -0.15
Mmp13P33435 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.11□□□□□ -0.15
Mmp13P33435 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp13P33435 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp13P33435 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp13P33435 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Mmp13P33435 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp13P33435 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mmp13P33435 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp13P33435 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Mmp13P33435 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Gm27622-201ENSMUST00000183779 60 ntBASIC14.1□□□□□ -0.15
Mmp13P33435 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.1□□□□□ -0.15
Mmp13P33435 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.1□□□□□ -0.15
Mmp13P33435 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mmp13P33435 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.1□□□□□ -0.15
Mmp13P33435 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mmp13P33435 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp13P33435 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Mmp13P33435 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.09□□□□□ -0.15
Mmp13P33435 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Gm13823-201ENSMUST00000119930 345 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Gm2445-201ENSMUST00000182798 989 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms