Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.15□□□□□ -0.14
Nfkb1P25799 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nfkb1P25799 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.15□□□□□ -0.14
Nfkb1P25799 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Mir698-201ENSMUST00000102164 109 ntBASIC14.15□□□□□ -0.14
Nfkb1P25799 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm17150-201ENSMUST00000165577 381 ntBASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.15□□□□□ -0.14
Nfkb1P25799 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.15□□□□□ -0.14
Nfkb1P25799 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nfkb1P25799 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.15□□□□□ -0.14
Nfkb1P25799 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.15□□□□□ -0.15
Nfkb1P25799 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm13829-201ENSMUST00000119600 138 ntBASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm12485-201ENSMUST00000119641 291 ntBASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.14□□□□□ -0.15
Nfkb1P25799 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm27892-201ENSMUST00000185017 106 ntBASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm2495-201ENSMUST00000191160 466 ntBASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.14□□□□□ -0.15
Nfkb1P25799 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nfkb1P25799 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nfkb1P25799 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.13□□□□□ -0.15
Nfkb1P25799 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Gm15429-201ENSMUST00000151268 798 ntBASIC14.13□□□□□ -0.15
Nfkb1P25799 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.13□□□□□ -0.15
Nfkb1P25799 Gm6266-201ENSMUST00000203844 806 ntBASIC14.13□□□□□ -0.15
Nfkb1P25799 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms