Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm6244-201ENSMUST00000178732 841 ntBASIC15.05■□□□□ -0
Pde6bP23440 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.05■□□□□ -0
Pde6bP23440 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pde6bP23440 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.05■□□□□ -0
Pde6bP23440 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.05■□□□□ -0
Pde6bP23440 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.05■□□□□ -0
Pde6bP23440 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
Pde6bP23440 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.05■□□□□ -0
Pde6bP23440 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pde6bP23440 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pde6bP23440 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pde6bP23440 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.04■□□□□ -0
Pde6bP23440 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pde6bP23440 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.04■□□□□ -0
Pde6bP23440 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.04■□□□□ -0
Pde6bP23440 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Pde6bP23440 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.04■□□□□ -0
Pde6bP23440 Gm11425-201ENSMUST00000119608 498 ntBASIC15.04■□□□□ -0
Pde6bP23440 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.04■□□□□ -0
Pde6bP23440 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.04■□□□□ -0
Pde6bP23440 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.04■□□□□ -0
Pde6bP23440 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.04■□□□□ -0
Pde6bP23440 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pde6bP23440 Gm9396-201ENSMUST00000076703 567 ntBASIC15.04■□□□□ -0
Pde6bP23440 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pde6bP23440 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pde6bP23440 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6bP23440 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pde6bP23440 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.03■□□□□ -0
Pde6bP23440 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pde6bP23440 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.03■□□□□ -0
Pde6bP23440 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pde6bP23440 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.03■□□□□ -0
Pde6bP23440 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Pde6bP23440 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.03■□□□□ -0
Pde6bP23440 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 AY702102-202ENSMUST00000194651 1173 ntBASIC15.03■□□□□ -0
Pde6bP23440 Gm43094-201ENSMUST00000196549 921 ntBASIC15.03■□□□□ -0
Pde6bP23440 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.03■□□□□ -0
Pde6bP23440 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.03■□□□□ -0
Pde6bP23440 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Gm9899-201ENSMUST00000065519 555 ntBASIC15.03■□□□□ -0
Pde6bP23440 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.03■□□□□ -0
Pde6bP23440 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pde6bP23440 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pde6bP23440 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pde6bP23440 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pde6bP23440 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pde6bP23440 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Pde6bP23440 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms