Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.89□□□□□ -0.35
Clk1P22518 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clk1P22518 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Clk1P22518 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.89□□□□□ -0.35
Clk1P22518 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Gm6415-201ENSMUST00000118488 348 ntBASIC12.89□□□□□ -0.35
Clk1P22518 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.89□□□□□ -0.35
Clk1P22518 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.89□□□□□ -0.35
Clk1P22518 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Clk1P22518 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Clk1P22518 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.89□□□□□ -0.35
Clk1P22518 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Clk1P22518 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.89□□□□□ -0.35
Clk1P22518 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Clk1P22518 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clk1P22518 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.89□□□□□ -0.35
Clk1P22518 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.88□□□□□ -0.35
Clk1P22518 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.88□□□□□ -0.35
Clk1P22518 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.88□□□□□ -0.35
Clk1P22518 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.88□□□□□ -0.35
Clk1P22518 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.88□□□□□ -0.35
Clk1P22518 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.88□□□□□ -0.35
Clk1P22518 Gm28630-201ENSMUST00000187806 498 ntBASIC12.88□□□□□ -0.35
Clk1P22518 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.88□□□□□ -0.35
Clk1P22518 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.88□□□□□ -0.35
Clk1P22518 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.88□□□□□ -0.35
Clk1P22518 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.88□□□□□ -0.35
Clk1P22518 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clk1P22518 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.88□□□□□ -0.35
Clk1P22518 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clk1P22518 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms