Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxb9P20615 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxb9P20615 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxb9P20615 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxb9P20615 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxb9P20615 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hoxb9P20615 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxb9P20615 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hoxb9P20615 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.18□□□□□ -0.3
Hoxb9P20615 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Gm24694-201ENSMUST00000180054 110 ntBASIC13.18□□□□□ -0.3
Hoxb9P20615 Mir8102-201ENSMUST00000184148 139 ntBASIC13.18□□□□□ -0.3
Hoxb9P20615 Gm27663-201ENSMUST00000184839 110 ntBASIC13.18□□□□□ -0.3
Hoxb9P20615 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxb9P20615 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxb9P20615 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.17□□□□□ -0.3
Hoxb9P20615 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.17□□□□□ -0.3
Hoxb9P20615 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.17□□□□□ -0.3
Hoxb9P20615 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxb9P20615 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.17□□□□□ -0.3
Hoxb9P20615 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxb9P20615 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.17□□□□□ -0.3
Hoxb9P20615 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxb9P20615 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxb9P20615 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.16□□□□□ -0.3
Hoxb9P20615 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxb9P20615 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Gm22189-201ENSMUST00000103822 86 ntBASIC13.16□□□□□ -0.3
Hoxb9P20615 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxb9P20615 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxb9P20615 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxb9P20615 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms