Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccl3P10855 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccl3P10855 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccl3P10855 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Gm27516-201ENSMUST00000184237 98 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 Gm38266-201ENSMUST00000194931 421 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 Gm3961-201ENSMUST00000204425 994 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl3P10855 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl3P10855 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 Gm45930-201ENSMUST00000221330 292 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 Gm10268-201ENSMUST00000085340 555 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.11□□□□□ -0.47
Ccl3P10855 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Ccl3P10855 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl3P10855 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.1□□□□□ -0.47
Ccl3P10855 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccl3P10855 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ccl3P10855 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccl3P10855 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl3P10855 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.1□□□□□ -0.47
Ccl3P10855 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm27501-201ENSMUST00000183599 107 ntBASIC12.1□□□□□ -0.47
Ccl3P10855 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm37922-201ENSMUST00000195596 455 ntBASIC12.1□□□□□ -0.47
Ccl3P10855 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm43118-201ENSMUST00000199149 775 ntBASIC12.1□□□□□ -0.47
Ccl3P10855 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Ccl3P10855 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccl3P10855 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.1□□□□□ -0.47
Ccl3P10855 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl3P10855 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccl3P10855 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.1□□□□□ -0.47
Ccl3P10855 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.1□□□□□ -0.47
Ccl3P10855 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ccl3P10855 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl3P10855 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccl3P10855 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccl3P10855 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ccl3P10855 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ccl3P10855 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl3P10855 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms