Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PtcraP0C6B2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
PtcraP0C6B2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PtcraP0C6B2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
PtcraP0C6B2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.98□□□□□ -0.49
PtcraP0C6B2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.98□□□□□ -0.49
PtcraP0C6B2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.98□□□□□ -0.49
PtcraP0C6B2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.98□□□□□ -0.49
PtcraP0C6B2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PtcraP0C6B2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.97□□□□□ -0.49
PtcraP0C6B2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm12151-201ENSMUST00000121374 290 ntBASIC11.97□□□□□ -0.49
PtcraP0C6B2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm9522-201ENSMUST00000182394 926 ntBASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm29667-201ENSMUST00000190817 490 ntBASIC11.97□□□□□ -0.49
PtcraP0C6B2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.97□□□□□ -0.49
PtcraP0C6B2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PtcraP0C6B2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PtcraP0C6B2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
PtcraP0C6B2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms