Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc8P09025 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.55□□□□□ -0.08
Hoxc8P09025 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc8P09025 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc8P09025 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc8P09025 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc8P09025 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc8P09025 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hoxc8P09025 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm16202-201ENSMUST00000117532 544 ntBASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm11591-201ENSMUST00000120063 702 ntBASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm7584-201ENSMUST00000175829 940 ntBASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm38158-201ENSMUST00000194617 339 ntBASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm43758-201ENSMUST00000199500 367 ntBASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm7783-201ENSMUST00000204795 781 ntBASIC14.54□□□□□ -0.08
Hoxc8P09025 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.54□□□□□ -0.08
Hoxc8P09025 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hoxc8P09025 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxc8P09025 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.53□□□□□ -0.08
Hoxc8P09025 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Hoxc8P09025 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.53□□□□□ -0.08
Hoxc8P09025 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.53□□□□□ -0.08
Hoxc8P09025 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hoxc8P09025 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.53□□□□□ -0.08
Hoxc8P09025 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.53□□□□□ -0.08
Hoxc8P09025 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.53□□□□□ -0.08
Hoxc8P09025 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hoxc8P09025 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hoxc8P09025 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxc8P09025 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxc8P09025 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Hoxc8P09025 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxc8P09025 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxc8P09025 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxc8P09025 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.52□□□□□ -0.08
Hoxc8P09025 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxc8P09025 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxc8P09025 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.52□□□□□ -0.09
Hoxc8P09025 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 Gm13350-201ENSMUST00000120519 479 ntBASIC14.52□□□□□ -0.09
Hoxc8P09025 Gm13342-201ENSMUST00000121055 207 ntBASIC14.52□□□□□ -0.09
Hoxc8P09025 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.52□□□□□ -0.09
Hoxc8P09025 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 Cts7-204ENSMUST00000225321 1257 ntBASIC14.52□□□□□ -0.09
Hoxc8P09025 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hoxc8P09025 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms