Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ApoeP08226 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 Gm13884-201ENSMUST00000118103 829 ntBASIC13.03□□□□□ -0.32
ApoeP08226 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.03□□□□□ -0.32
ApoeP08226 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.03□□□□□ -0.32
ApoeP08226 AA543401-201ENSMUST00000164248 1269 ntBASIC13.03□□□□□ -0.32
ApoeP08226 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.03□□□□□ -0.32
ApoeP08226 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 BC001981-202ENSMUST00000191393 1545 ntBASIC13.03□□□□□ -0.32
ApoeP08226 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.02□□□□□ -0.32
ApoeP08226 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ApoeP08226 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ApoeP08226 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ApoeP08226 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ApoeP08226 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Gm12350-201ENSMUST00000121208 462 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ApoeP08226 Gm29310-201ENSMUST00000185468 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21825-201ENSMUST00000185728 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm29109-201ENSMUST00000185895 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21896-201ENSMUST00000186520 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21873-201ENSMUST00000186728 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21794-201ENSMUST00000187056 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21880-201ENSMUST00000187275 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21826-201ENSMUST00000187451 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21198-201ENSMUST00000188393 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21749-201ENSMUST00000189343 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21901-201ENSMUST00000189568 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm29424-201ENSMUST00000189716 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm28599-201ENSMUST00000189838 694 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21867-201ENSMUST00000189917 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm29269-201ENSMUST00000190087 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21722-201ENSMUST00000190153 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm28423-201ENSMUST00000190701 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21899-201ENSMUST00000190745 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21910-201ENSMUST00000191163 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21849-201ENSMUST00000191571 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm28678-201ENSMUST00000191593 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm20910-201ENSMUST00000193268 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm21871-201ENSMUST00000194621 696 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Gm5864-201ENSMUST00000202263 970 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ApoeP08226 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.02□□□□□ -0.33
ApoeP08226 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.02□□□□□ -0.33
ApoeP08226 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
ApoeP08226 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ApoeP08226 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.02□□□□□ -0.33
ApoeP08226 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
ApoeP08226 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ApoeP08226 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
ApoeP08226 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ApoeP08226 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ApoeP08226 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.01□□□□□ -0.33
ApoeP08226 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms