Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.58□□□□□ -0.4
Col4a2P08122 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Col4a2P08122 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.58□□□□□ -0.4
Col4a2P08122 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.58□□□□□ -0.4
Col4a2P08122 Gm21769-201ENSMUST00000211922 111 ntBASIC12.58□□□□□ -0.4
Col4a2P08122 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col4a2P08122 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col4a2P08122 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.58□□□□□ -0.4
Col4a2P08122 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col4a2P08122 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col4a2P08122 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.58□□□□□ -0.4
Col4a2P08122 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.58□□□□□ -0.4
Col4a2P08122 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col4a2P08122 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Col4a2P08122 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.57□□□□□ -0.4
Col4a2P08122 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.57□□□□□ -0.4
Col4a2P08122 Mir877-201ENSMUST00000104738 85 ntBASIC12.57□□□□□ -0.4
Col4a2P08122 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Col4a2P08122 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.57□□□□□ -0.4
Col4a2P08122 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.57□□□□□ -0.4
Col4a2P08122 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.57□□□□□ -0.4
Col4a2P08122 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col4a2P08122 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Col4a2P08122 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Gm11637-201ENSMUST00000120601 592 ntBASIC12.57□□□□□ -0.4
Col4a2P08122 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.57□□□□□ -0.4
Col4a2P08122 Gm7809-201ENSMUST00000153199 742 ntBASIC12.57□□□□□ -0.4
Col4a2P08122 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.57□□□□□ -0.4
Col4a2P08122 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.57□□□□□ -0.4
Col4a2P08122 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a2P08122 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a2P08122 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col4a2P08122 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.56□□□□□ -0.4
Col4a2P08122 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.56□□□□□ -0.4
Col4a2P08122 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Col4a2P08122 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.56□□□□□ -0.4
Col4a2P08122 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.56□□□□□ -0.4
Col4a2P08122 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.56□□□□□ -0.4
Col4a2P08122 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.56□□□□□ -0.4
Col4a2P08122 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col4a2P08122 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a2P08122 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms