Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TnfP06804 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TnfP06804 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TnfP06804 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TnfP06804 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
TnfP06804 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TnfP06804 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.58□□□□□ -0.07
TnfP06804 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
TnfP06804 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TnfP06804 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TnfP06804 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TnfP06804 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TnfP06804 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TnfP06804 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.58□□□□□ -0.08
TnfP06804 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TnfP06804 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Gm6266-201ENSMUST00000203844 806 ntBASIC14.58□□□□□ -0.08
TnfP06804 Gm7287-201ENSMUST00000205267 602 ntBASIC14.58□□□□□ -0.08
TnfP06804 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.58□□□□□ -0.08
TnfP06804 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TnfP06804 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TnfP06804 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.58□□□□□ -0.08
TnfP06804 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.58□□□□□ -0.08
TnfP06804 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TnfP06804 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TnfP06804 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TnfP06804 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.57□□□□□ -0.08
TnfP06804 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TnfP06804 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TnfP06804 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Gm4984-201ENSMUST00000115987 360 ntBASIC14.57□□□□□ -0.08
TnfP06804 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.57□□□□□ -0.08
TnfP06804 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.57□□□□□ -0.08
TnfP06804 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Gm27839-201ENSMUST00000184242 106 ntBASIC14.57□□□□□ -0.08
TnfP06804 Gm44397-201ENSMUST00000195950 113 ntBASIC14.57□□□□□ -0.08
TnfP06804 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.57□□□□□ -0.08
TnfP06804 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.57□□□□□ -0.08
TnfP06804 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.57□□□□□ -0.08
TnfP06804 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TnfP06804 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.56□□□□□ -0.08
TnfP06804 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TnfP06804 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.56□□□□□ -0.08
TnfP06804 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TnfP06804 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.56□□□□□ -0.08
TnfP06804 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.56□□□□□ -0.08
TnfP06804 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.56□□□□□ -0.08
TnfP06804 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.56□□□□□ -0.08
TnfP06804 Gm44719-201ENSMUST00000206404 149 ntBASIC14.56□□□□□ -0.08
TnfP06804 Gm17330-201ENSMUST00000221047 165 ntBASIC14.56□□□□□ -0.08
TnfP06804 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms