Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PrnpP04925 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PrnpP04925 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
PrnpP04925 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PrnpP04925 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PrnpP04925 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
PrnpP04925 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
PrnpP04925 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PrnpP04925 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.2□□□□□ -0.14
PrnpP04925 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.2□□□□□ -0.14
PrnpP04925 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
PrnpP04925 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PrnpP04925 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PrnpP04925 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PrnpP04925 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Gm37922-201ENSMUST00000195596 455 ntBASIC14.2□□□□□ -0.14
PrnpP04925 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.2□□□□□ -0.14
PrnpP04925 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.2□□□□□ -0.14
PrnpP04925 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.2□□□□□ -0.14
PrnpP04925 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Gm10268-201ENSMUST00000085340 555 ntBASIC14.2□□□□□ -0.14
PrnpP04925 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PrnpP04925 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PrnpP04925 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
PrnpP04925 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.2□□□□□ -0.14
PrnpP04925 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.2□□□□□ -0.14
PrnpP04925 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PrnpP04925 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.19□□□□□ -0.14
PrnpP04925 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.19□□□□□ -0.14
PrnpP04925 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.19□□□□□ -0.14
PrnpP04925 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.19□□□□□ -0.14
PrnpP04925 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.19□□□□□ -0.14
PrnpP04925 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.19□□□□□ -0.14
PrnpP04925 Gm37008-201ENSMUST00000195712 319 ntBASIC14.19□□□□□ -0.14
PrnpP04925 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PrnpP04925 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.19□□□□□ -0.14
PrnpP04925 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Gm9823-201ENSMUST00000051212 327 ntBASIC14.19□□□□□ -0.14
PrnpP04925 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.19□□□□□ -0.14
PrnpP04925 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PrnpP04925 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.19□□□□□ -0.14
PrnpP04925 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
PrnpP04925 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PrnpP04925 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PrnpP04925 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.18□□□□□ -0.14
PrnpP04925 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.18□□□□□ -0.14
PrnpP04925 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PrnpP04925 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.18□□□□□ -0.14
PrnpP04925 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PrnpP04925 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.18□□□□□ -0.14
PrnpP04925 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.18□□□□□ -0.14
PrnpP04925 Gm13369-201ENSMUST00000119442 987 ntBASIC14.18□□□□□ -0.14
PrnpP04925 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
PrnpP04925 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PrnpP04925 Gm37497-201ENSMUST00000195830 798 ntBASIC14.18□□□□□ -0.14
PrnpP04925 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PrnpP04925 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms