Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CcnkO88874 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.29□□□□□ -0.44
CcnkO88874 Gm14494-201ENSMUST00000118786 435 ntBASIC12.29□□□□□ -0.44
CcnkO88874 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.29□□□□□ -0.44
CcnkO88874 Gm5479-201ENSMUST00000160578 435 ntBASIC12.29□□□□□ -0.44
CcnkO88874 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.29□□□□□ -0.44
CcnkO88874 Gm45098-201ENSMUST00000207179 657 ntBASIC12.29□□□□□ -0.44
CcnkO88874 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.29□□□□□ -0.44
CcnkO88874 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.29□□□□□ -0.44
CcnkO88874 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.29□□□□□ -0.44
CcnkO88874 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.29□□□□□ -0.44
CcnkO88874 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CcnkO88874 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CcnkO88874 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.29□□□□□ -0.44
CcnkO88874 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CcnkO88874 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CcnkO88874 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Gm14042-201ENSMUST00000120139 833 ntBASIC12.28□□□□□ -0.44
CcnkO88874 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.28□□□□□ -0.44
CcnkO88874 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Gm5264-201ENSMUST00000190584 848 ntBASIC12.28□□□□□ -0.44
CcnkO88874 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.28□□□□□ -0.44
CcnkO88874 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
CcnkO88874 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CcnkO88874 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CcnkO88874 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CcnkO88874 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CcnkO88874 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcnkO88874 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcnkO88874 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
CcnkO88874 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
CcnkO88874 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcnkO88874 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.27□□□□□ -0.44
CcnkO88874 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcnkO88874 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.27□□□□□ -0.44
CcnkO88874 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcnkO88874 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcnkO88874 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CcnkO88874 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CcnkO88874 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcnkO88874 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CcnkO88874 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcnkO88874 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CcnkO88874 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CcnkO88874 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcnkO88874 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcnkO88874 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.27□□□□□ -0.45
CcnkO88874 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CcnkO88874 Gm11543-201ENSMUST00000120758 370 ntBASIC12.27□□□□□ -0.45
CcnkO88874 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
CcnkO88874 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CcnkO88874 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.27□□□□□ -0.45
CcnkO88874 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.27□□□□□ -0.45
CcnkO88874 Gm8000-201ENSMUST00000188378 592 ntBASIC12.27□□□□□ -0.45
CcnkO88874 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms