Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Gm13453-201ENSMUST00000118708 357 ntBASIC13.23□□□□□ -0.29
Hcn1O88704 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.23□□□□□ -0.29
Hcn1O88704 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.23□□□□□ -0.29
Hcn1O88704 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.23□□□□□ -0.29
Hcn1O88704 Gm45453-201ENSMUST00000211758 853 ntBASIC13.23□□□□□ -0.29
Hcn1O88704 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.23□□□□□ -0.29
Hcn1O88704 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hcn1O88704 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Hcn1O88704 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hcn1O88704 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.23□□□□□ -0.29
Hcn1O88704 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hcn1O88704 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hcn1O88704 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hcn1O88704 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hcn1O88704 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.23□□□□□ -0.29
Hcn1O88704 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Hcn1O88704 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hcn1O88704 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.22□□□□□ -0.29
Hcn1O88704 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hcn1O88704 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.22□□□□□ -0.29
Hcn1O88704 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.22□□□□□ -0.29
Hcn1O88704 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Hcn1O88704 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.22□□□□□ -0.29
Hcn1O88704 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.22□□□□□ -0.29
Hcn1O88704 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.22□□□□□ -0.29
Hcn1O88704 Dupd1-202ENSMUST00000224735 548 ntBASIC13.22□□□□□ -0.29
Hcn1O88704 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Hcn1O88704 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Hcn1O88704 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hcn1O88704 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hcn1O88704 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hcn1O88704 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hcn1O88704 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.21□□□□□ -0.29
Hcn1O88704 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Hcn1O88704 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.21□□□□□ -0.29
Hcn1O88704 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.21□□□□□ -0.29
Hcn1O88704 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hcn1O88704 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hcn1O88704 Gm14767-201ENSMUST00000121559 586 ntBASIC13.21□□□□□ -0.29
Hcn1O88704 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Hcn1O88704 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.21□□□□□ -0.29
Hcn1O88704 Gm20949-201ENSMUST00000206478 952 ntBASIC13.21□□□□□ -0.29
Hcn1O88704 Gm16476-201ENSMUST00000221544 139 ntBASIC13.21□□□□□ -0.29
Hcn1O88704 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.21□□□□□ -0.29
Hcn1O88704 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hcn1O88704 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.21□□□□□ -0.3
Hcn1O88704 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Hcn1O88704 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Hcn1O88704 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hcn1O88704 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hcn1O88704 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hcn1O88704 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hcn1O88704 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Hcn1O88704 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Hcn1O88704 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms