Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cops4O88544 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cops4O88544 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cops4O88544 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cops4O88544 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cops4O88544 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cops4O88544 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cops4O88544 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.72□□□□□ -0.37
Cops4O88544 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cops4O88544 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cops4O88544 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cops4O88544 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Cops4O88544 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.71□□□□□ -0.37
Cops4O88544 Gm5479-201ENSMUST00000160578 435 ntBASIC12.71□□□□□ -0.37
Cops4O88544 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cops4O88544 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.71□□□□□ -0.37
Cops4O88544 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.71□□□□□ -0.37
Cops4O88544 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.71□□□□□ -0.37
Cops4O88544 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cops4O88544 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cops4O88544 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cops4O88544 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cops4O88544 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cops4O88544 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cops4O88544 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cops4O88544 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cops4O88544 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cops4O88544 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cops4O88544 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cops4O88544 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cops4O88544 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Gm9385-201ENSMUST00000117563 472 ntBASIC12.7□□□□□ -0.38
Cops4O88544 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Gm1401-201ENSMUST00000122048 772 ntBASIC12.7□□□□□ -0.38
Cops4O88544 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.7□□□□□ -0.38
Cops4O88544 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Cops4O88544 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.7□□□□□ -0.38
Cops4O88544 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.7□□□□□ -0.38
Cops4O88544 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.7□□□□□ -0.38
Cops4O88544 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cops4O88544 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Cops4O88544 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cops4O88544 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Cops4O88544 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cops4O88544 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.69□□□□□ -0.38
Cops4O88544 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cops4O88544 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cops4O88544 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Gm12260-201ENSMUST00000122447 411 ntBASIC12.69□□□□□ -0.38
Cops4O88544 Gm9727-201ENSMUST00000161387 555 ntBASIC12.69□□□□□ -0.38
Cops4O88544 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms