Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Gm26927-201ENSMUST00000182385 965 ntBASIC15.1■□□□□ 0.01
Trdmt1O55055 Mir8109-201ENSMUST00000184375 117 ntBASIC15.1■□□□□ 0.01
Trdmt1O55055 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Gm37922-201ENSMUST00000195596 455 ntBASIC15.1■□□□□ 0.01
Trdmt1O55055 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.1■□□□□ 0.01
Trdmt1O55055 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdmt1O55055 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.1■□□□□ 0.01
Trdmt1O55055 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Trdmt1O55055 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdmt1O55055 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Gm45930-201ENSMUST00000221330 292 ntBASIC15.09■□□□□ 0.01
Trdmt1O55055 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.09■□□□□ 0.01
Trdmt1O55055 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trdmt1O55055 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdmt1O55055 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trdmt1O55055 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trdmt1O55055 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdmt1O55055 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trdmt1O55055 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trdmt1O55055 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdmt1O55055 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdmt1O55055 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trdmt1O55055 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trdmt1O55055 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.08■□□□□ 0
Trdmt1O55055 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.08■□□□□ 0
Trdmt1O55055 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Gm43118-201ENSMUST00000199149 775 ntBASIC15.08■□□□□ 0
Trdmt1O55055 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.08■□□□□ 0
Trdmt1O55055 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.08■□□□□ 0
Trdmt1O55055 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trdmt1O55055 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.08■□□□□ 0
Trdmt1O55055 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.08■□□□□ 0
Trdmt1O55055 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trdmt1O55055 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms