Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.81■□□□□ 0.12
Copb2O55029 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Gm12928-201ENSMUST00000117115 573 ntBASIC15.81■□□□□ 0.12
Copb2O55029 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Copb2O55029 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.81■□□□□ 0.12
Copb2O55029 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Mir7085-201ENSMUST00000184353 66 ntBASIC15.81■□□□□ 0.12
Copb2O55029 Gm8463-201ENSMUST00000208573 613 ntBASIC15.81■□□□□ 0.12
Copb2O55029 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Copb2O55029 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.81■□□□□ 0.12
Copb2O55029 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Copb2O55029 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Copb2O55029 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Copb2O55029 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Copb2O55029 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.8■□□□□ 0.12
Copb2O55029 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.8■□□□□ 0.12
Copb2O55029 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.8■□□□□ 0.12
Copb2O55029 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.8■□□□□ 0.12
Copb2O55029 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.8■□□□□ 0.12
Copb2O55029 Gm44719-201ENSMUST00000206404 149 ntBASIC15.8■□□□□ 0.12
Copb2O55029 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.8■□□□□ 0.12
Copb2O55029 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Copb2O55029 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.8■□□□□ 0.12
Copb2O55029 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.8■□□□□ 0.12
Copb2O55029 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Copb2O55029 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Copb2O55029 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Copb2O55029 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Copb2O55029 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.79■□□□□ 0.12
Copb2O55029 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.79■□□□□ 0.12
Copb2O55029 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Copb2O55029 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Copb2O55029 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.79■□□□□ 0.12
Copb2O55029 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Gm4984-201ENSMUST00000115987 360 ntBASIC15.79■□□□□ 0.12
Copb2O55029 Gm11425-201ENSMUST00000119608 498 ntBASIC15.79■□□□□ 0.12
Copb2O55029 Mir1894-201ENSMUST00000122802 81 ntBASIC15.79■□□□□ 0.12
Copb2O55029 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.79■□□□□ 0.12
Copb2O55029 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.79■□□□□ 0.12
Copb2O55029 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.79■□□□□ 0.12
Copb2O55029 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Gm9396-201ENSMUST00000076703 567 ntBASIC15.79■□□□□ 0.12
Copb2O55029 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Copb2O55029 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Copb2O55029 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms