Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.97□□□□□ -0.33
Cx3cl1O35188 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Gm7730-201ENSMUST00000212486 454 ntBASIC12.97□□□□□ -0.33
Cx3cl1O35188 Gm5425-201ENSMUST00000214125 459 ntBASIC12.97□□□□□ -0.33
Cx3cl1O35188 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.97□□□□□ -0.33
Cx3cl1O35188 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Gm21854-201ENSMUST00000179901 471 ntBASIC12.96□□□□□ -0.33
Cx3cl1O35188 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.96□□□□□ -0.33
Cx3cl1O35188 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.96□□□□□ -0.33
Cx3cl1O35188 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.96□□□□□ -0.33
Cx3cl1O35188 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.96□□□□□ -0.33
Cx3cl1O35188 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.96□□□□□ -0.33
Cx3cl1O35188 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.96□□□□□ -0.33
Cx3cl1O35188 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cx3cl1O35188 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cx3cl1O35188 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms