Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Gm28659-201ENSMUST00000188013 759 ntBASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Shisa8J3QNX5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shisa8J3QNX5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Gm15957-201ENSMUST00000118893 974 ntBASIC12.54□□□□□ -0.4
Shisa8J3QNX5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Gm44492-201ENSMUST00000197012 141 ntBASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.54□□□□□ -0.4
Shisa8J3QNX5 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shisa8J3QNX5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms