Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Gm24694-201ENSMUST00000180054 110 ntBASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Gm27663-201ENSMUST00000184839 110 ntBASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Gm5186-201ENSMUST00000218781 920 ntBASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh11xF6ZNL5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Gm7488-201ENSMUST00000117148 684 ntBASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh11xF6ZNL5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.21■□□□□ 0.02
Pcdh11xF6ZNL5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh11xF6ZNL5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh11xF6ZNL5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh11xF6ZNL5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh11xF6ZNL5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh11xF6ZNL5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh11xF6ZNL5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms