Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm15429-201ENSMUST00000151268 798 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Gm38223-201ENSMUST00000194484 695 ntBASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb9E9Q5G2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb9E9Q5G2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb9E9Q5G2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Gm8463-201ENSMUST00000208573 613 ntBASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Gm6983-201ENSMUST00000214912 628 ntBASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms