Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm24659-201ENSMUST00000180212 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm24169-201ENSMUST00000180244 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm23689-201ENSMUST00000180354 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm27359-201ENSMUST00000184153 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm27785-201ENSMUST00000184268 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm27466-201ENSMUST00000184396 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm27703-201ENSMUST00000184836 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gm10275-202ENSMUST00000168697 495 ntBASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gm8396-201ENSMUST00000057361 823 ntBASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gm10275-201ENSMUST00000092620 635 ntBASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.84□□□□□ -0.19
Gm28043E0CXC2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Gm28043E0CXC2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.83□□□□□ -0.19
Gm28043E0CXC2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm28043E0CXC2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
Gm28043E0CXC2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm28043E0CXC2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Gm26308-201ENSMUST00000157768 69 ntBASIC13.83□□□□□ -0.2
Gm28043E0CXC2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.83□□□□□ -0.2
Gm28043E0CXC2 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms