Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Gm6623-201ENSMUST00000173570 544 ntBASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Gm7889-201ENSMUST00000185591 958 ntBASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx6-2D3Z4R4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms