Protein–RNA interactions for Protein: D3YXL0

Ccdc170, Coiled-coil domain-containing 170, mousemouse

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc170D3YXL0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm2810-201ENSMUST00000118681 990 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Mir3113-201ENSMUST00000175478 76 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm29310-201ENSMUST00000185468 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21825-201ENSMUST00000185728 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm29109-201ENSMUST00000185895 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21896-201ENSMUST00000186520 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21873-201ENSMUST00000186728 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21794-201ENSMUST00000187056 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21880-201ENSMUST00000187275 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21826-201ENSMUST00000187451 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21198-201ENSMUST00000188393 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21749-201ENSMUST00000189343 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21901-201ENSMUST00000189568 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm29424-201ENSMUST00000189716 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm28599-201ENSMUST00000189838 694 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21867-201ENSMUST00000189917 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm29269-201ENSMUST00000190087 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21722-201ENSMUST00000190153 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm28423-201ENSMUST00000190701 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21899-201ENSMUST00000190745 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21910-201ENSMUST00000191163 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21849-201ENSMUST00000191571 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm28678-201ENSMUST00000191593 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm20910-201ENSMUST00000193268 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm21871-201ENSMUST00000194621 696 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc170D3YXL0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Gm18057-201ENSMUST00000208220 503 ntBASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.29□□□□□ -0.12
Ccdc170D3YXL0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc170D3YXL0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc170D3YXL0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc170D3YXL0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc170D3YXL0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc170D3YXL0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc170D3YXL0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc170D3YXL0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms