Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmf1B9EKI3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Gm28911-201ENSMUST00000188837 117 ntBASIC18.6■□□□□ 0.57
Tmf1B9EKI3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.6■□□□□ 0.57
Tmf1B9EKI3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Gm17330-201ENSMUST00000221047 165 ntBASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.6■□□□□ 0.57
Tmf1B9EKI3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Gm37912-201ENSMUST00000191895 3076 ntBASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.59■□□□□ 0.57
Tmf1B9EKI3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Gm37133-201ENSMUST00000192705 1922 ntBASIC18.59■□□□□ 0.57
Tmf1B9EKI3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tmf1B9EKI3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmf1B9EKI3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.58■□□□□ 0.57
Tmf1B9EKI3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmf1B9EKI3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.58■□□□□ 0.57
Tmf1B9EKI3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Gm13829-201ENSMUST00000119600 138 ntBASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Gm8602-201ENSMUST00000184045 607 ntBASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tmf1B9EKI3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.57■□□□□ 0.56
Tmf1B9EKI3 Gm2495-201ENSMUST00000191160 466 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms