Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Gm12887B1AVM1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.63
Gm12887B1AVM1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Gm12887B1AVM1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Gm12887B1AVM1 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.15□□□□□ -0.63
Gm12887B1AVM1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Gm12887B1AVM1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Gm13597-201ENSMUST00000121239 375 ntBASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm12887B1AVM1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Gm7153-201ENSMUST00000117092 455 ntBASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Gm15483-201ENSMUST00000120338 456 ntBASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Gm43347-201ENSMUST00000200226 580 ntBASIC11.13□□□□□ -0.63
Gm12887B1AVM1 AV026068-213ENSMUST00000223675 1171 ntBASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm12887B1AVM1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms