Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm14832-201ENSMUST00000121289 322 ntBASIC7.07□□□□□ -1.28
Ubr4A2AN08 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm8723-201ENSMUST00000166076 820 ntBASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm8701-201ENSMUST00000169259 874 ntBASIC7.07□□□□□ -1.28
Ubr4A2AN08 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm18059-201ENSMUST00000208073 580 ntBASIC7.07□□□□□ -1.28
Ubr4A2AN08 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm8839-201ENSMUST00000121279 1645 ntBASIC7.07□□□□□ -1.28
Ubr4A2AN08 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Gm17796-201ENSMUST00000189015 1213 ntBASIC7.07□□□□□ -1.28
Ubr4A2AN08 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 AC113031.8-201ENSMUST00000227856 631 ntBASIC7.07□□□□□ -1.28
Ubr4A2AN08 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ubr4A2AN08 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Gm4462-201ENSMUST00000166453 492 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Gm26989-201ENSMUST00000182608 749 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Ighv1-51-201ENSMUST00000192903 354 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 AY036118-201ENSMUST00000200021 923 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 AC153962.2-201ENSMUST00000219417 550 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Gm12783-201ENSMUST00000121425 397 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Gm13019-201ENSMUST00000120000 276 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Gm24943-201ENSMUST00000158329 433 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Gm18159-201ENSMUST00000174516 1070 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Mir7686-201ENSMUST00000200604 57 ntBASIC7.06□□□□□ -1.28
Ubr4A2AN08 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
Ubr4A2AN08 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ubr4A2AN08 Rn7sk-201ENSMUST00000083103 331 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms