Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm13453-201ENSMUST00000118708 357 ntBASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm14767-201ENSMUST00000121559 586 ntBASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm2445-201ENSMUST00000182798 989 ntBASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm27680-201ENSMUST00000184192 160 ntBASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Lnp1A0A1B0GSK3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm29741-201ENSMUST00000192667 421 ntBASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lnp1A0A1B0GSK3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms