Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm28033-201ENSMUST00000184224 96 ntBASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms