Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm9947-201ENSMUST00000067599 2920 ntBASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm44492-201ENSMUST00000197012 141 ntBASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm14752-201ENSMUST00000120719 2075 ntBASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm14140-201ENSMUST00000119999 995 ntBASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm11543-201ENSMUST00000120758 370 ntBASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav13-4-dv7A0A075B6C2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms