Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Gm5184-201ENSMUST00000220417 1702 ntBASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 CT010506.4-201ENSMUST00000225457 351 ntBASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Gm8749-201ENSMUST00000117737 331 ntBASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Gm15372-201ENSMUST00000120729 834 ntBASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 AC153889.1-201ENSMUST00000219257 330 ntBASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Cmtm5-203ENSMUST00000227441 610 ntBASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Otx2os1-206ENSMUST00000228153 787 ntBASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav8-1A0A075B641 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms