Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb2S4R1M3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb2S4R1M3 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.82□□□□□ -0.2
H2afb2S4R1M3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb2S4R1M3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Acot6-202ENSMUST00000222921 3622 ntBASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.81□□□□□ -0.2
H2afb2S4R1M3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm13385-201ENSMUST00000121089 220 ntBASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm9063-201ENSMUST00000223299 582 ntBASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm5867-201ENSMUST00000063197 592 ntBASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb2S4R1M3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms