Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.74□□□□□ -0.69
CcsQ9WU84 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.74□□□□□ -0.69
CcsQ9WU84 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Gm11594-201ENSMUST00000122313 162 ntBASIC10.74□□□□□ -0.69
CcsQ9WU84 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Gm8318-201ENSMUST00000182954 872 ntBASIC10.74□□□□□ -0.69
CcsQ9WU84 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.74□□□□□ -0.69
CcsQ9WU84 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Gm10175-201ENSMUST00000086013 645 ntBASIC10.74□□□□□ -0.69
CcsQ9WU84 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CcsQ9WU84 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.74□□□□□ -0.69
CcsQ9WU84 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CcsQ9WU84 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.73□□□□□ -0.69
CcsQ9WU84 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.73□□□□□ -0.69
CcsQ9WU84 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.73□□□□□ -0.69
CcsQ9WU84 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CcsQ9WU84 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.73□□□□□ -0.69
CcsQ9WU84 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.73□□□□□ -0.69
CcsQ9WU84 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.73□□□□□ -0.69
CcsQ9WU84 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.73□□□□□ -0.69
CcsQ9WU84 Gm5867-201ENSMUST00000063197 592 ntBASIC10.73□□□□□ -0.69
CcsQ9WU84 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.73□□□□□ -0.69
CcsQ9WU84 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.73□□□□□ -0.69
CcsQ9WU84 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.73□□□□□ -0.69
CcsQ9WU84 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CcsQ9WU84 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.72□□□□□ -0.69
CcsQ9WU84 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms