Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Crlf1Q9JM58 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Crlf1Q9JM58 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Crlf1Q9JM58 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Crlf1Q9JM58 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Crlf1Q9JM58 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Crlf1Q9JM58 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Crlf1Q9JM58 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Crlf1Q9JM58 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Crlf1Q9JM58 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Crlf1Q9JM58 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Crlf1Q9JM58 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Crlf1Q9JM58 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Crlf1Q9JM58 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Crlf1Q9JM58 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Crlf1Q9JM58 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Gm6023-201ENSMUST00000118217 606 ntBASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Gm24514-201ENSMUST00000174961 285 ntBASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Gm42997-202ENSMUST00000200321 985 ntBASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Gm7046-201ENSMUST00000221351 977 ntBASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Crlf1Q9JM58 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Crlf1Q9JM58 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11□□□□□ -0.65
Crlf1Q9JM58 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11□□□□□ -0.65
Crlf1Q9JM58 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Crlf1Q9JM58 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11□□□□□ -0.65
Crlf1Q9JM58 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11□□□□□ -0.65
Crlf1Q9JM58 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11□□□□□ -0.65
Crlf1Q9JM58 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms