Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Gm13223-201ENSMUST00000118609 747 ntBASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Gm27631-201ENSMUST00000184163 466 ntBASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Gm27430-201ENSMUST00000184585 107 ntBASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Gm28630-201ENSMUST00000187806 498 ntBASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Gm10576-201ENSMUST00000191927 825 ntBASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Gm44333-201ENSMUST00000197168 107 ntBASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a2Q9JLR1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a2Q9JLR1 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.46□□□□□ -0.42
Sec61a2Q9JLR1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sec61a2Q9JLR1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a2Q9JLR1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a2Q9JLR1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a2Q9JLR1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Gm15920-201ENSMUST00000118998 402 ntBASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Gm44872-201ENSMUST00000207864 420 ntBASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Gm45453-201ENSMUST00000211758 853 ntBASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a2Q9JLR1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Gm9719-201ENSMUST00000162765 543 ntBASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Mir125a-201ENSMUST00000083545 68 ntBASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a2Q9JLR1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms